orca
Getting Started
Installation
Requirements
Installing from source
Configuration
Dependencies
Quick Start
Starting the Pipeline
1. Start Celery Workers
2. Monitor with Flower
Running Pipeline Scripts
Flagging and Averaging
Dynamic Spectrum Production
Basic Usage in Python
ORCA Usage Guide
Configuration and Environment activation
Table of Contents
Concatenation
Flagging
Obtain and flag bad antennas (by correlator number)
Flag using AOFlagger and a specified strategy
Model Generation
Delay Calibration
Bandpass Calibration
Change Phase Center
Imaging with WSClean
Peeling with TTCal
QA Plotting
Delay Calibration QA Plot
Bandpass Calibration QA Plot
Gain Calibration QA
Subband Pipeline
Subband Processing Pipeline — Architecture & File Reference
Overview
File Map
Submission & Orchestration
Processing Logic (no Celery decorators — pure functions, testable locally)
Science Extraction Modules (Phase 2, steps 7b A–D)
Phase 3 — Wideband Aggregation (post_process_science)
Configuration
Utilities & Wrappers
Node ↔ Subband ↔ Queue Mapping
Dynamic Scheduling Mode
How it works
Usage
Monitoring the Redis work queue
Static vs Dynamic comparison
Directory Layout
Imaging Steps
External Dependencies
How It Connects
Timing Instrumentation
Phase 1 tags (per MS)
Phase 2 tags (per subband)
Phase 3 tags (wideband, post-run)
CLI Examples
Worker Management Guide
Quick Reference
After Code Changes
Adding/Removing Nodes
Submitting Jobs
Monitoring
Troubleshooting
Useful debug commands
ORCA Celery Deployment Guide
Table of Contents
Installation
Cluster Architecture
Node Summary
Components Overview
Message Flow
Component Details
Queues
Configuration
User Configuration File
Shared Environment
Managing Workers
Starting Workers
Stopping Workers
Checking Worker Status
Code Updates
Monitoring
Flower Web UI
Command-Line Monitoring
Inspecting Tasks
Adding New Users
1. RabbitMQ Setup
2. User Configuration
3. Environment Setup
4. Verify Setup
Troubleshooting
Workers Not Responding
Import Errors on Worker Start
Tasks Stuck in Queue
Worker Memory Issues
Redis Full
Quick Reference
Key Files
Key Commands
Service Locations
Infrastructure Reference
RabbitMQ
Redis
API Reference
API Reference
orca
Submodules
orca.autoscaler
orca.celery
orca.configmanager
orca.flagging
orca.metadata
orca.resources
orca.tasks
orca.transform
orca.utils
orca.wrapper
orca
Index
Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
Z
A
add() (in module orca.tasks.fortests)
add_timestamps_to_images() (in module orca.transform.subband_processing)
analytic_beam (class in orca.utils.beam_nmahesh)
AnalyticBeam (class in orca.utils.beam)
analyze_amp_vs_uv() (in module orca.transform.hot_baselines)
analyze_snapshot_quality() (in module orca.transform.subband_processing)
ANGULAR_DIAMETER_1AU (in module orca.transform.solar_system_cutout)
animation (in module orca.tasks.subband_tasks)
antname_to_correlator (in module orca.resources.correlator_map)
AOFLAGGER_STRATEGY (in module orca.resources.subband_config)
ap (in module orca.tasks.run_image)
app (in module orca.celery)
apply_calibration() (in module orca.tasks.run_image)
(in module orca.transform.subband_processing)
apply_flags_to_ms() (in module orca.transform.hot_baselines)
apply_gain_scale_in_place() (in module orca.transform.gainscaling)
apply_pb_correction() (in module orca.transform.pb_correction)
apply_pb_correction_to_images() (in module orca.transform.subband_processing)
apply_uv_cut() (in module orca.transform.hot_baselines)
apply_warp() (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
applycal_data_col() (in module orca.transform.calibration)
applycal_data_col_nocopy() (in module orca.transform.calibration)
applycal_data_col_task() (in module orca.tasks.pipeline_tasks)
applycal_in_mem() (in module orca.transform.calibration)
applycal_in_mem_cross() (in module orca.transform.calibration)
archive_results() (in module orca.transform.subband_processing)
auto_corr_data_and_flag() (in module orca.transform.gainscaling)
average_frequency() (in module orca.transform.averagems)
average_frequency_nighttime_task() (in module orca.tasks.pipeline_tasks)
average_frequency_nvme_task() (in module orca.tasks.pipeline_tasks)
average_frequency_task() (in module orca.tasks.pipeline_tasks)
average_ms() (in module orca.transform.averagems)
average_with_rms_threshold() (in module orca.transform.photometry)
azelgrid (orca.utils.beam.WoodyBeam attribute)
B
BAD_CORR_NUMS (in module orca.tasks.run_image)
bandpass_nvme_task() (in module orca.tasks.pipeline_tasks)
BANDPASS_TBL (in module orca.tasks.run_image)
BASE_73 (in module orca.tasks.peel_experiment)
BaseBeam (class in orca.utils.beam)
BDSF_AVAILABLE (in module orca.transform.subband_processing)
BEAM_FILE_PATH (in module orca.utils.beam)
beam_file_path (orca.utils.beam_nmahesh.woody_beam property)
BEAM_MODEL_H5 (in module orca.resources.subband_config)
BEAM_PATH (in module orca.transform.extractor_pb_75)
BEAM_SEARCH_MULTIPLIER (in module orca.transform.cutout)
beamfile (orca.utils.beam_nmahesh.jones_beam property)
beamIQUV (orca.utils.beam.WoodyBeam attribute)
(orca.utils.beam_nmahesh.woody_beam attribute)
beamIQUVfile (orca.utils.beam.WoodyBeam attribute)
beamjonesfile (orca.utils.beam.jones attribute)
BeamModel (class in orca.transform.extractor_pb_75)
blank_all_pixels() (in module orca.utils.modelutils)
BLANK_SIZE_DEG (in module orca.tasks.run_image)
blank_source() (in module orca.tasks.run_image)
build_complete_map() (in module orca.transform.hot_baselines)
build_output_paths() (in module orca.utils.calibrationutils)
C
CAL_TABLE (in module orca.tasks.peel_experiment)
calc_model_flux() (in module orca.transform.extractor_pb_75)
calculate_gain_scale() (in module orca.transform.gainscaling)
calculate_local_rms_map() (in module orca.transform.transient_search)
calculate_spwmap() (in module orca.transform.subband_processing)
calfilepath (orca.utils.calibratormodel.model_generation property)
CALIB_DATA (in module orca.resources.subband_config)
(in module orca.transform.extractor_pb_75)
calibration_time_range() (in module orca.utils.calibrationutils)
CALIM_NODES (in module orca.resources.subband_config)
CalimScaler (class in orca.autoscaler)
CAS_A (in module orca.tasks.peel_experiment)
(in module orca.utils.coordutils)
CAS_A_UNPOLARIZED_RESOLVED (in module orca.utils.sourcemodels)
CASA_AVAILABLE (in module orca.transform.cutout)
(in module orca.transform.solar_system_cutout)
CASA_TASKS_AVAILABLE (in module orca.transform.flux_check_cutout)
,
[1]
CELERY_APP_NAME (in module orca.celery)
change_phase_center() (in module orca.wrapper.change_phase_centre)
change_phase_center_task() (in module orca.tasks.pipeline_tasks)
check_collection_not_empty() (in module orca.utils.validationutils)
check_corrected_data_present() (in module orca.utils.modelutils)
check_for_file_presence() (in module orca.utils.modelutils)
check_h5_fits_consistency() (in module orca.utils.modelutils)
check_image_quality() (in module orca.utils.modelutils)
check_negative_in_model() (orca.utils.calibratormodel.model_generation method)
check_output() (in module orca.utils.commandline)
CHGCENTRE_PATH (in module orca.wrapper.change_phase_centre)
chunks_by_integration() (orca.metadata.pathsmanagers.OfflinePathsManager method)
chunks_by_time() (orca.metadata.pathsmanagers.OfflinePathsManager method)
CLEAN_MGAIN (in module orca.transform.imaging)
closest_ms_by_lst() (in module orca.calibration.delay_pipeline)
cluster (in module orca.configmanager)
co_add() (in module orca.utils.fitsutils)
co_add_arr() (in module orca.utils.fitsutils)
coadd_fits() (in module orca.transform.imaging)
collect_fast_fits() (in module orca.utils.modelutils)
compress_fits_to_h5() (in module orca.utils.modelutils)
compute_interpolation() (in module orca.transform.image_warp)
compute_lst_and_alts() (in module orca.tasks.peel_experiment)
compute_offsets() (in module orca.transform.image_warp)
compute_rms_from_fits() (in module orca.tasks.peel_experiment)
concat_issue_fieldid() (in module orca.utils.msfix)
concatenate_ms() (in module orca.transform.subband_processing)
config (in module orca.configmanager)
CONFIG_I (in module orca.transform.transient_search)
CONFIG_V (in module orca.transform.transient_search)
conv_deg() (in module orca.utils.calibratormodel)
convert_and_deconvolve() (in module orca.transform.deconvolve)
convert_to_heliocentric_coords() (in module orca.utils.modelutils)
copy() (in module orca.utils.copyutils)
copy_ms() (in module orca.tasks.run_image)
copy_ms_nighttime_task() (in module orca.tasks.pipeline_tasks)
copy_ms_task() (in module orca.tasks.pipeline_tasks)
copy_ms_to_calibration_task() (in module orca.tasks.pipeline_tasks)
copy_ms_to_nvme() (in module orca.transform.subband_processing)
copy_ms_to_nvme_task() (in module orca.tasks.pipeline_tasks)
copyfile() (in module orca.utils.copyutils)
copytree() (in module orca.calibration.delay_pipeline)
core_outrigger_slices() (in module orca.utils.maths)
correct_fastms_amplitude_scale() (in module orca.utils.modelutils)
correct_for_restoring_beam() (orca.utils.calibratormodel.model_generation method)
correct_primary_beam() (in module orca.utils.modelutils)
correct_scaling() (in module orca.transform.gainscaling)
CORRECTED_DATA (in module orca.flagging.flagoperations)
(in module orca.transform.peeling)
correlator_to_antname (in module orca.resources.correlator_map)
,
[1]
CPU_COUNT (in module orca.transform.image_warp)
create_bright_source_mask() (in module orca.transform.transient_search)
create_static_masks() (in module orca.transform.transient_search)
CRFREQ (orca.utils.beam.jones attribute)
(orca.utils.beam.WoodyBeam attribute)
crossmatch() (in module orca.transform.image_warp)
ctrl_freq() (orca.utils.beam_nmahesh.jones_beam method)
(orca.utils.beam_nmahesh.woody_beam method)
(orca.utils.calibratormodel.model_generation method)
CUTOUT_SIZE (in module orca.transform.cutout)
(in module orca.transform.flux_check_cutout)
(in module orca.transform.transient_search)
CYG_A (in module orca.tasks.peel_experiment)
(in module orca.utils.coordutils)
CYG_A_UNPOLARIZED_RESOLVED (in module orca.utils.sourcemodels)
D
dada2ms() (in module orca.wrapper.dada2ms)
dada2ms_config (in module orca.wrapper.dada2ms)
dada2ms_exec (in module orca.wrapper.dada2ms)
DATA (in module orca.flagging.flagoperations)
(in module orca.transform.peeling)
data_product_path() (orca.metadata.stageiii.StageIIIPathsManager method)
DEAD_POWER_THRESHOLD (in module orca.transform.precalflag)
DEFAULT_ALPHA (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
DEFAULT_BEAM_ARCSEC (in module orca.transform.cutout)
DEFAULT_CONF_PATH (in module orca.configmanager)
DEFAULT_MAXITER (in module orca.tasks.peel_experiment)
DELAY_TABLE (in module orca.tasks.run_image)
DETECTION_SIGMA (in module orca.transform.cutout)
(in module orca.transform.solar_system_cutout)
df (in module orca.utils.flagutils)
dftspectrum() (in module orca.transform.dftspectrum)
di_cal() (in module orca.transform.calibration)
di_cal_multi() (in module orca.transform.calibration)
di_cal_multi_v2() (in module orca.transform.calibration)
diff() (in module orca.utils.vis_sub)
do_prediction() (orca.utils.calibratormodel.model_generation method)
do_sum() (in module orca.tasks.fortests)
dpp (orca.metadata.pathsmanagers.OfflinePathsManager attribute)
DYNAMIC_NODE_POOL (in module orca.resources.subband_config)
DYNAMIC_WORK_QUEUE (in module orca.tasks.subband_tasks)
dynspec_map() (in module orca.transform.spectrum)
dynspec_map_v2() (in module orca.transform.spectrum_v2)
dynspec_map_v3() (in module orca.transform.spectrum_v3)
dynspec_reduce() (in module orca.transform.spectrum)
dynspec_reduce_v2() (in module orca.transform.spectrum_v2)
dynspec_reduce_v3() (in module orca.transform.spectrum_v3)
E
EMAIL_RECIPIENT (in module orca.transform.post_process_science)
end (orca.metadata.stageiii.StageIIIPathsManager attribute)
,
[1]
estimate_image_noise() (in module orca.transform.photometry)
execs (in module orca.configmanager)
extract_ant_number() (in module orca.transform.hot_baselines)
extract_original_ms_task() (in module orca.tasks.pipeline_tasks)
extract_peaks_flex() (in module orca.transform.transient_search)
extract_sources_to_df() (in module orca.transform.subband_processing)
F
filename (orca.utils.calibratormodel.model_generation property)
filter_bilobed_artifacts() (in module orca.transform.transient_search)
find_all_images() (in module orca.transform.cutout)
find_archive_files_for_subband() (in module orca.transform.subband_processing)
find_closest() (in module orca.utils.datetimeutils)
find_dead_ants() (in module orca.transform.precalflag)
find_deep_image() (in module orca.transform.subband_processing)
find_freq() (in module orca.tasks.run_image)
find_image_pairs() (in module orca.transform.cutout)
find_solar_system_images() (in module orca.transform.solar_system_cutout)
fit_primary_beam() (in module orca.transform.extractor_pb_75)
FIT_SIGMA_THRESHOLD (in module orca.transform.cutout)
fix_field_id() (in module orca.transform.subband_processing)
flag_ant_chan_from_autocorr() (in module orca.transform.flagging)
flag_ants() (in module orca.flagging.flagoperations)
(in module orca.transform.flagging)
flag_ants_from_postcal_autocorr() (in module orca.flagging.flag_bad_ants)
flag_ants_task() (in module orca.tasks.pipeline_tasks)
flag_bad_antennas() (in module orca.transform.subband_processing)
flag_bad_ants() (in module orca.flagging.flag_bad_ants)
flag_bad_bls() (in module orca.flagging.flag_bad_bls)
flag_bad_chans() (in module orca.flagging.flag_bad_chans)
flag_bad_integrations() (in module orca.transform.subband_processing)
flag_bad_sol() (in module orca.transform.calibration)
flag_bls() (in module orca.flagging.flagoperations)
FLAG_COUNT_FACTOR (in module orca.transform.flagging)
flag_on_autocorr() (in module orca.transform.flagging)
FLAG_TABLE (in module orca.utils.flagutils)
flag_with_aoflagger() (in module orca.transform.flagging)
flag_with_aoflagger_task() (in module orca.tasks.pipeline_tasks)
FLUX_RATIO_MAX (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
FLUX_RATIO_MIN (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
freq (orca.utils.beam_nmahesh.jones_beam attribute)
(orca.utils.beam_nmahesh.woody_beam attribute)
G
gainQA() (in module orca.transform.qa)
gaintable_dir (orca.metadata.pathsmanagers.OfflinePathsManager property)
gather_detections() (in module orca.transform.post_process_science)
gen_dummy_image() (orca.utils.calibratormodel.model_generation method)
gen_model_cl() (orca.utils.calibratormodel.model_generation method)
gen_model_file() (orca.utils.calibratormodel.model_generation method)
gen_model_from_dict() (in module orca.utils.calibrationutils)
gen_model_ms_stokes() (in module orca.utils.calibrationutils)
gen_spectrum() (in module orca.transform.spectrum)
generate_model_from_component_list() (orca.utils.calibratormodel.model_generation method)
generate_warp_screens() (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
get_altaz_at_ovro() (in module orca.utils.coordutils)
get_antenna_positions() (in module orca.transform.hot_baselines)
get_aoflagger_strategy() (in module orca.utils.paths)
get_bad_antenna_names() (in module orca.utils.flagutils)
get_bad_antenna_numbers() (in module orca.transform.subband_processing)
get_bad_ants() (in module orca.utils.flagutils)
get_bad_correlator_numbers() (in module orca.utils.flagutils)
get_bad_correlators_from_anthealth() (in module orca.utils.mnc_antennas)
get_bcal_path() (orca.metadata.pathsmanagers.OfflinePathsManager method)
(orca.metadata.pathsmanagers.PathsManager method)
(orca.metadata.stageiii.StageIIIPathsManager method)
get_beam_file() (orca.utils.beam_nmahesh.woody_beam method)
get_beam_size_arcsec() (in module orca.transform.cutout)
get_body_position() (in module orca.transform.solar_system_cutout)
get_caltable_freq() (in module orca.utils.modelutils)
get_commit_id() (in module orca.utils.gitutils)
get_cutout() (in module orca.utils.fitsutils)
get_data_matrix() (in module orca.transform.hot_baselines)
get_data_product_path() (orca.metadata.pathsmanagers.OfflinePathsManager method)
get_flag_npy_path() (orca.metadata.pathsmanagers.OfflinePathsManager method)
get_flagged_solution_num() (in module orca.utils.modelutils)
get_freqstr_from_name() (in module orca.utils.modelutils)
get_gaintable_path() (orca.metadata.pathsmanagers.OfflinePathsManager method)
(orca.metadata.stageiii.StageIIIPathsManager method)
get_image_data() (in module orca.utils.modelutils)
get_image_maxmin() (in module orca.utils.modelutils)
get_image_resources() (in module orca.resources.subband_config)
get_inner_rms() (in module orca.transform.post_process_science)
get_keyword() (in module orca.utils.modelutils)
get_lst_from_filename() (in module orca.utils.calibrationutils)
get_max_val() (orca.utils.beam_nmahesh.jones_beam method)
get_mean_frequency() (in module orca.transform.hot_baselines)
get_midpoint_time() (in module orca.transform.transient_search)
get_model_flux() (in module orca.transform.flux_check_cutout)
get_ms_id_map() (in module orca.transform.hot_baselines)
get_ms_parent_path() (orca.metadata.pathsmanagers.OfflinePathsManager method)
get_ms_path() (orca.metadata.pathsmanagers.OfflinePathsManager method)
get_msinfo() (in module orca.utils.modelutils)
get_muller_matrix_stokes() (orca.utils.beam_nmahesh.analytic_beam method)
(orca.utils.beam_nmahesh.jones_beam method)
(orca.utils.beam_nmahesh.woody_beam method)
get_muller_matrix_XY() (orca.utils.beam_nmahesh.analytic_beam method)
(orca.utils.beam_nmahesh.jones_beam method)
(orca.utils.beam_nmahesh.woody_beam method)
get_obs_midpoint() (in module orca.transform.solar_system_cutout)
get_obs_time_interval() (in module orca.utils.modelutils)
get_peak_around_src() (in module orca.utils.fitsutils)
get_phase_center() (in module orca.wrapper.change_phase_centre)
get_pixel_scale() (in module orca.resources.subband_config)
get_pixel_size() (in module orca.resources.subband_config)
get_primary_beam_single_source() (in module orca.utils.modelutils)
get_queue_for_subband() (in module orca.resources.subband_config)
get_relative_path() (in module orca.utils.calibrationutils)
get_response() (orca.transform.extractor_pb_75.BeamModel method)
get_risen_source_list() (orca.utils.calibratormodel.model_generation method)
get_rms() (in module orca.utils.modelutils)
get_sample_header() (in module orca.utils.fitsutils)
get_selfcal_time_to_apply() (in module orca.utils.modelutils)
get_solar_altaz_multiple_times() (in module orca.utils.modelutils)
get_solar_azel() (in module orca.utils.modelutils)
get_solar_loc_pix() (in module orca.utils.modelutils)
get_source_pol_factors() (orca.utils.beam_nmahesh.analytic_beam static method)
(orca.utils.beam_nmahesh.jones_beam method)
(orca.utils.beam_nmahesh.woody_beam static method)
get_strong_source_list() (in module orca.utils.modelutils)
get_sun_pos() (in module orca.utils.modelutils)
get_time_from_name() (in module orca.utils.modelutils)
get_timestamp_from_header() (in module orca.transform.cutout)
(in module orca.transform.solar_system_cutout)
get_timestr_from_name() (in module orca.utils.modelutils)
get_total_fields() (in module orca.utils.modelutils)
get_utc_hour_from_path() (in module orca.tasks.pipeline_tasks)
get_uvlambda_from_uvdist() (in module orca.utils.modelutils)
getimrms() (in module orca.transform.image_sub)
gridsize (orca.utils.beam.WoodyBeam attribute)
H
HOT_BASELINE_PARAMS (in module orca.resources.subband_config)
I
Ibeam (orca.utils.beam.WoodyBeam attribute)
(orca.utils.beam_nmahesh.woody_beam attribute)
identify_bad_ants() (in module orca.transform.flagging)
identify_bad_components() (in module orca.transform.hot_baselines)
IM_SCALE_DEGREE (in module orca.transform.imaging)
image_plane_correction() (in module orca.transform.image_warp)
IMAGE_SIZE (in module orca.transform.image_warp)
image_sub() (in module orca.transform.image_sub)
imaging_pipeline_task() (in module orca.tasks.imaging_tasks)
imaging_shared_pipeline_task() (in module orca.tasks.imaging_tasks)
IMAGING_STEPS (in module orca.resources.subband_config)
IMSIZE (in module orca.transform.imaging)
includesun (orca.utils.calibratormodel.model_generation attribute)
integrate() (in module orca.transform.integrate)
integrated_image() (in module orca.transform.imaging)
interpolator (orca.transform.extractor_pb_75.BeamModel attribute)
INVERSE_C_MS (in module orca.transform.dftspectrum)
IONOSPHERE_PAD_ARCSEC_85MHZ (in module orca.transform.cutout)
IONOSPHERE_REF_FREQ_MHZ (in module orca.transform.cutout)
is_fft_overflow() (in module orca.transform.precalflag)
is_visible() (in module orca.utils.coordutils)
is_within_transit_window() (in module orca.utils.calibrationutils)
J
jones (class in orca.utils.beam)
jones_beam (class in orca.utils.beam_nmahesh)
JULIA060_ENV_NAME (in module orca.tasks.peel_experiment)
JULIA_BIN (in module orca.tasks.run_image)
K
knn_search() (in module orca.utils.beam_nmahesh)
L
load_catalog() (in module orca.transform.extractor_pb_75)
(in module orca.transform.transient_search)
load_data() (orca.transform.extractor_pb_75.BeamModel method)
load_masked_image() (in module orca.tasks.peel_experiment)
load_ref_catalog() (in module orca.transform.ionospheric_dewarping)
load_targets() (in module orca.transform.cutout)
load_yaml() (in module orca.configmanager)
loaded (orca.transform.extractor_pb_75.BeamModel attribute)
log (in module orca.configmanager)
LOG (in module orca.tasks.imaging_peel_pipeline)
(in module orca.tasks.run_image)
log (in module orca.transform.averagems)
(in module orca.transform.flagging)
(in module orca.transform.gainscaling)
(in module orca.transform.integrate)
(in module orca.transform.peeling)
(in module orca.utils.commandline)
(in module orca.wrapper.wsclean)
logger (in module orca.flagging.flag_bad_chans)
(in module orca.tasks.imaging_tasks)
(in module orca.tasks.subband_tasks)
(in module orca.transform.calibration)
(in module orca.transform.hot_baselines)
(in module orca.transform.image_warp)
(in module orca.transform.imaging)
(in module orca.transform.ionospheric_dewarping)
(in module orca.transform.pb_correction)
(in module orca.transform.photometry)
(in module orca.transform.post_process_science)
(in module orca.transform.precalflag)
(in module orca.transform.qa)
(in module orca.transform.spectrum)
(in module orca.transform.spectrum_v2)
(in module orca.transform.spectrum_v3)
(in module orca.transform.subband_processing)
lst_to_hms_str() (in module orca.tasks.peel_experiment)
LUSTRE_ARCHIVE_DIR (in module orca.resources.subband_config)
LUSTRE_NIGHTTIME_DIR (in module orca.resources.subband_config)
LUSTRE_PRODUCTS_DIR (in module orca.resources.subband_config)
LWA_N_ANT (in module orca.utils.constants)
LWA_N_CHAN (in module orca.utils.constants)
LWA_N_SPW (in module orca.utils.constants)
LWA_SIZE_TOLERANCE (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
M
main() (in module orca.flagging.flag_bad_ants)
(in module orca.flagging.flag_bad_bls)
(in module orca.flagging.flag_bad_chans)
(in module orca.flagging.flag_bls)
(in module orca.utils.mnc_antennas)
(in module orca.utils.msfix)
make_diff_image() (in module orca.tasks.peel_experiment)
make_dirty_image() (in module orca.transform.imaging)
make_fig() (in module orca.transform.photometry)
make_movie_from_fits() (in module orca.transform.imaging)
make_three_panel_png() (in module orca.tasks.peel_experiment)
make_wsclean_compatible() (in module orca.utils.modelutils)
manual_split_corrected_ms() (in module orca.utils.modelutils)
match_dimensions() (orca.utils.beam_nmahesh.jones_beam method)
MATCH_RADIUS (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
MAX_CUTOUTS (in module orca.transform.transient_search)
merge_flags() (in module orca.flagging.flagoperations)
merge_group_flags() (in module orca.flagging.flagoperations)
min_beam_val (orca.utils.calibratormodel.model_generation attribute)
MIN_ELEVATION (in module orca.transform.cutout)
(in module orca.transform.flux_check_cutout)
model (orca.utils.calibratormodel.model_generation attribute)
model_generation (class in orca.utils.calibratormodel)
modelcl (orca.utils.calibratormodel.model_generation attribute)
module
orca
orca.autoscaler
orca.calibration.bandpass_pipeline
orca.calibration.delay_pipeline
orca.celery
orca.configmanager
orca.flagging
orca.flagging.flag_bad_ants
orca.flagging.flag_bad_bls
orca.flagging.flag_bad_chans
orca.flagging.flag_bls
orca.flagging.flagoperations
orca.metadata
orca.metadata.pathsmanagers
orca.metadata.stageiii
orca.resources
orca.resources.aoflagger_strategies
orca.resources.correlator_map
orca.resources.subband_config
orca.resources.system_config
orca.tasks
orca.tasks.fortests
orca.tasks.imaging_peel_pipeline
orca.tasks.imaging_tasks
orca.tasks.peel_experiment
orca.tasks.pipeline_tasks
orca.tasks.run_image
orca.tasks.subband_tasks
orca.transform
orca.transform.averagems
orca.transform.calibration
orca.transform.cutout
orca.transform.deconvolve
orca.transform.dftspectrum
orca.transform.extractor_pb_75
orca.transform.flagging
orca.transform.flux_check_cutout
orca.transform.gainscaling
orca.transform.hot_baselines
orca.transform.image_sub
orca.transform.image_warp
orca.transform.imaging
orca.transform.integrate
orca.transform.ionospheric_dewarping
orca.transform.pb_correction
orca.transform.peeling
orca.transform.photometry
orca.transform.post_process_science
orca.transform.precalflag
orca.transform.qa
orca.transform.qa_plotting
orca.transform.solar_system_cutout
orca.transform.spectrum
orca.transform.spectrum_v2
orca.transform.spectrum_v3
orca.transform.subband_processing
orca.transform.transient_search
orca.utils
orca.utils.beam
orca.utils.beam_nmahesh
orca.utils.calibrationutils
orca.utils.calibratormodel
orca.utils.commandline
orca.utils.constants
orca.utils.coordutils
orca.utils.copyutils
orca.utils.datetimeutils
orca.utils.fitsutils
orca.utils.flagutils
orca.utils.gitutils
orca.utils.maths
orca.utils.mnc_antennas
orca.utils.modelutils
orca.utils.msfix
orca.utils.paths
orca.utils.sourcemodels
orca.utils.validationutils
orca.utils.vis_sub
orca.wrapper
orca.wrapper.change_phase_centre
orca.wrapper.dada2ms
orca.wrapper.ttcal
orca.wrapper.wsclean
MOON_MEAN_DIAMETER_ARCSEC (in module orca.transform.solar_system_cutout)
MOON_MEAN_DISTANCE_KM (in module orca.transform.solar_system_cutout)
MOUNTAIN_AZ_INC (in module orca.utils.coordutils)
ms_list (orca.metadata.stageiii.StageIIIPathsManager property)
msfile (orca.utils.beam_nmahesh.jones_beam property)
(orca.utils.beam_nmahesh.woody_beam property)
N
N_CHAN (in module orca.transform.spectrum)
N_CHAN_OUT (in module orca.transform.spectrum_v2)
(in module orca.transform.spectrum_v3)
NEW_ENV (in module orca.wrapper.wsclean)
NODE_SUBBAND_MAP (in module orca.resources.subband_config)
noise() (in module orca.transform.photometry)
num_freq (orca.utils.beam_nmahesh.jones_beam attribute)
num_pol (orca.utils.calibratormodel.model_generation attribute)
NVME_BASE_DIR (in module orca.resources.subband_config)
NVME_ROOT (in module orca.tasks.imaging_tasks)
NVSS_MAX_SIZE_DEG (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
O
OfflinePathsManager (class in orca.metadata.pathsmanagers)
on_chord_error() (in module orca.tasks.subband_tasks)
orca
module
orca.autoscaler
module
orca.calibration.bandpass_pipeline
module
orca.calibration.delay_pipeline
module
orca.celery
module
orca.configmanager
module
orca.flagging
module
orca.flagging.flag_bad_ants
module
orca.flagging.flag_bad_bls
module
orca.flagging.flag_bad_chans
module
orca.flagging.flag_bls
module
orca.flagging.flagoperations
module
orca.metadata
module
orca.metadata.pathsmanagers
module
orca.metadata.stageiii
module
orca.resources
module
orca.resources.aoflagger_strategies
module
orca.resources.correlator_map
module
orca.resources.subband_config
module
orca.resources.system_config
module
orca.tasks
module
orca.tasks.fortests
module
orca.tasks.imaging_peel_pipeline
module
orca.tasks.imaging_tasks
module
orca.tasks.peel_experiment
module
orca.tasks.pipeline_tasks
module
orca.tasks.run_image
module
orca.tasks.subband_tasks
module
orca.transform
module
orca.transform.averagems
module
orca.transform.calibration
module
orca.transform.cutout
module
orca.transform.deconvolve
module
orca.transform.dftspectrum
module
orca.transform.extractor_pb_75
module
orca.transform.flagging
module
orca.transform.flux_check_cutout
module
orca.transform.gainscaling
module
orca.transform.hot_baselines
module
orca.transform.image_sub
module
orca.transform.image_warp
module
orca.transform.imaging
module
orca.transform.integrate
module
orca.transform.ionospheric_dewarping
module
orca.transform.pb_correction
module
orca.transform.peeling
module
orca.transform.photometry
module
orca.transform.post_process_science
module
orca.transform.precalflag
module
orca.transform.qa
module
orca.transform.qa_plotting
module
orca.transform.solar_system_cutout
module
orca.transform.spectrum
module
orca.transform.spectrum_v2
module
orca.transform.spectrum_v3
module
orca.transform.subband_processing
module
orca.transform.transient_search
module
orca.utils
module
orca.utils.beam
module
orca.utils.beam_nmahesh
module
orca.utils.calibrationutils
module
orca.utils.calibratormodel
module
orca.utils.commandline
module
orca.utils.constants
module
orca.utils.coordutils
module
orca.utils.copyutils
module
orca.utils.datetimeutils
module
orca.utils.fitsutils
module
orca.utils.flagutils
module
orca.utils.gitutils
module
orca.utils.maths
module
orca.utils.mnc_antennas
module
orca.utils.modelutils
module
orca.utils.msfix
module
orca.utils.paths
module
orca.utils.sourcemodels
module
orca.utils.validationutils
module
orca.utils.vis_sub
module
orca.wrapper
module
orca.wrapper.change_phase_centre
module
orca.wrapper.dada2ms
module
orca.wrapper.ttcal
module
orca.wrapper.wsclean
module
ORCA_CONF_PATH (in module orca.configmanager)
outpath (orca.utils.calibratormodel.model_generation attribute)
OUTPUT_CAT_DIR (in module orca.transform.post_process_science)
OUTPUT_DIR (in module orca.transform.image_warp)
output_freq (orca.utils.calibratormodel.model_generation attribute)
overwrite (orca.utils.calibratormodel.model_generation attribute)
OVRO (in module orca.tasks.peel_experiment)
OVRO_LOC (in module orca.resources.subband_config)
(in module orca.transform.extractor_pb_75)
OVRO_LWA_LOCATION (in module orca.utils.coordutils)
P
parse_filename() (in module orca.utils.calibrationutils)
parse_utc_from_tag() (in module orca.tasks.peel_experiment)
parse_vlssr_text() (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
parser (in module orca.transform.post_process_science)
(in module orca.utils.vis_sub)
partitioned_by_hour (orca.metadata.stageiii.StageIIIPathsManager attribute)
,
[1]
PATCH_SIDE_SIZE (in module orca.transform.photometry)
path (orca.transform.extractor_pb_75.BeamModel attribute)
(orca.utils.beam.jones attribute)
(orca.utils.beam.WoodyBeam attribute)
PathsManager (class in orca.metadata.pathsmanagers)
pcp() (in module orca.tasks.fortests)
pcp_tree() (in module orca.tasks.fortests)
peel_experiment_task() (in module orca.tasks.peel_experiment)
peel_imaging_pipeline_task() (in module orca.tasks.imaging_peel_pipeline)
peel_with_ttcal() (in module orca.wrapper.ttcal)
peel_with_ttcal_maxiter5() (in module orca.tasks.imaging_peel_pipeline)
peel_with_ttcal_task() (in module orca.tasks.pipeline_tasks)
PEELING_PARAMS (in module orca.resources.subband_config)
phase_data_to_pos_inplace() (in module orca.transform.dftspectrum)
phase_shift_vis() (in module orca.transform.dftspectrum)
plot_autos() (in module orca.flagging.flag_bad_ants)
plot_bandpass_to_pdf_amp_phase() (in module orca.transform.qa_plotting)
plot_delay_difference_vs_antenna() (in module orca.transform.qa_plotting)
plot_delay_vs_antenna() (in module orca.transform.qa_plotting)
plot_diagnosis_figure() (in module orca.transform.hot_baselines)
plot_dirty() (in module orca.tasks.run_image)
plot_distortion_map() (in module orca.transform.extractor_pb_75)
plot_flag_metadata_all_polarizations_subplot() (in module orca.utils.flagutils)
plot_heatmap() (in module orca.transform.hot_baselines)
plot_image() (in module orca.transform.image_warp)
plot_separations() (in module orca.transform.image_warp)
plot_snapshot_diagnostics() (in module orca.transform.subband_processing)
plotbeam() (orca.utils.beam.WoodyBeam method)
point_source_model() (orca.utils.calibratormodel.model_generation method)
point_source_model_needed (orca.utils.calibratormodel.model_generation attribute)
pol (orca.utils.calibratormodel.model_generation property)
polarisations (orca.utils.calibratormodel.model_generation attribute)
predict (orca.utils.calibratormodel.model_generation attribute)
predict_flux() (orca.utils.calibratormodel.model_generation method)
prepare_one_ms_task() (in module orca.tasks.subband_tasks)
primary_beam_correction_val() (in module orca.utils.beam_nmahesh)
primary_beam_model (orca.utils.calibratormodel.model_generation attribute)
primary_beam_value() (orca.utils.calibratormodel.model_generation static method)
print_calibrator_table() (in module orca.transform.extractor_pb_75)
process_cutout() (in module orca.transform.flux_check_cutout)
process_ms() (in module orca.tasks.run_image)
process_solar_system() (in module orca.transform.solar_system_cutout)
process_subband_task() (in module orca.tasks.subband_tasks)
process_target() (in module orca.transform.cutout)
process_wideband_solar_system() (in module orca.transform.solar_system_cutout)
put_keyword() (in module orca.utils.modelutils)
Q
Qbeam (orca.utils.beam.WoodyBeam attribute)
(orca.utils.beam_nmahesh.woody_beam attribute)
queue_config (in module orca.configmanager)
R
R_MASK (in module orca.tasks.peel_experiment)
read_beam_file() (orca.utils.beam_nmahesh.analytic_beam method)
(orca.utils.beam_nmahesh.jones_beam method)
(orca.utils.beam_nmahesh.woody_beam method)
read_image_fits() (in module orca.utils.fitsutils)
read_ms() (in module orca.tasks.fortests)
recover_fits_from_h5() (in module orca.utils.modelutils)
redirect_casa_log() (in module orca.transform.subband_processing)
REDIS_EXPIRE_S (in module orca.transform.spectrum)
(in module orca.transform.spectrum_v2)
(in module orca.transform.spectrum_v3)
REDIS_KEY_PREFIX (in module orca.transform.spectrum)
(in module orca.transform.spectrum_v2)
(in module orca.transform.spectrum_v3)
REDIS_URL (in module orca.transform.spectrum)
(in module orca.transform.spectrum_v2)
(in module orca.transform.spectrum_v3)
remove_ms_task() (in module orca.tasks.pipeline_tasks)
rename_images() (in module orca.utils.modelutils)
rephase_center() (in module orca.tasks.run_image)
reproject_fits() (in module orca.transform.imaging)
REQUIRED_CONDA_ENV (in module orca.resources.subband_config)
reset_image() (orca.utils.calibratormodel.model_generation method)
restore_flag() (in module orca.utils.modelutils)
RFI_B (in module orca.utils.sourcemodels)
RFI_JSON (in module orca.tasks.peel_experiment)
robust_measure_flux() (in module orca.transform.cutout)
robust_rms() (in module orca.tasks.peel_experiment)
root_dir (orca.metadata.stageiii.StageIIIPathsManager attribute)
,
[1]
rot_ellipse() (in module orca.transform.image_sub)
ROW_NUMS (in module orca.transform.spectrum)
(in module orca.transform.spectrum_v2)
(in module orca.transform.spectrum_v3)
run_applycal_pre_peel() (in module orca.tasks.peel_experiment)
run_bandpass_calibration() (in module orca.calibration.bandpass_pipeline)
run_casa_task() (in module orca.transform.subband_processing)
run_delay_pipeline() (in module orca.calibration.delay_pipeline)
run_diagnostics() (in module orca.transform.hot_baselines)
run_entire_pipeline_on_one_cpu() (in module orca.tasks.pipeline_tasks)
run_entire_pipeline_on_one_cpu_nvme() (in module orca.tasks.pipeline_tasks)
run_flagging() (in module orca.tasks.run_image)
run_flux_check() (in module orca.transform.flux_check_cutout)
run_image_pipeline() (in module orca.tasks.imaging_tasks)
run_nvme_reduce_all_unconditional() (in module orca.tasks.pipeline_tasks)
run_pipeline_slow_on_one_cpu_nvme() (in module orca.tasks.pipeline_tasks)
run_post_processing() (in module orca.transform.post_process_science)
run_subprocess() (in module orca.transform.subband_processing)
run_test() (in module orca.transform.transient_search)
run_ttcal_with_conda() (in module orca.tasks.peel_experiment)
run_ttcal_zest() (in module orca.tasks.run_image)
run_wideband_stacking() (in module orca.transform.post_process_science)
run_wsclean_stage() (in module orca.tasks.peel_experiment)
S
SAMPLE_NAME (in module orca.transform.solar_system_cutout)
sanity_check() (in module orca.transform.qa)
save_flag_metadata() (in module orca.transform.flagging)
save_flag_metadata_nighttime_task() (in module orca.tasks.pipeline_tasks)
save_flag_metadata_nvme_task() (in module orca.tasks.pipeline_tasks)
save_flag_metadata_task() (in module orca.tasks.pipeline_tasks)
save_to_flag_npy() (in module orca.flagging.flagoperations)
SEARCH_RADIUS (in module orca.transform.flux_check_cutout)
search_src() (in module orca.transform.photometry)
SECRETS_FILE (in module orca.transform.post_process_science)
send_email_report() (in module orca.transform.post_process_science)
separate_pol (orca.utils.calibratormodel.model_generation attribute)
SIDEREAL_DAY (in module orca.metadata.pathsmanagers)
SNAPSHOT_CLEAN_I_PARAMS (in module orca.resources.subband_config)
SNAPSHOT_PARAMS (in module orca.resources.subband_config)
solar_alpha (orca.utils.calibratormodel.model_generation attribute)
solar_flux (orca.utils.calibratormodel.model_generation attribute)
SOLAR_SYSTEM_BODIES (in module orca.transform.solar_system_cutout)
source_ra_in_hours() (in module orca.utils.calibrationutils)
SOURCES_JSON (in module orca.tasks.peel_experiment)
(in module orca.tasks.run_image)
split_2pol_task() (in module orca.tasks.pipeline_tasks)
spws (in module orca.metadata.stageiii)
SRC_LIST (in module orca.utils.calibrationutils)
srcIQUV() (orca.utils.beam.AnalyticBeam method)
(orca.utils.beam.BaseBeam method)
(orca.utils.beam.WoodyBeam method)
srcjones() (orca.utils.beam.jones method)
(orca.utils.beam_nmahesh.analytic_beam method)
(orca.utils.beam_nmahesh.jones_beam method)
(orca.utils.beam_nmahesh.woody_beam method)
stack_images() (in module orca.transform.imaging)
STAGE_III_INTEGRATION_TIME (in module orca.utils.datetimeutils)
StageIIIPathsManager (class in orca.metadata.stageiii)
start (orca.metadata.stageiii.StageIIIPathsManager attribute)
,
[1]
std_and_max_around_coord() (in module orca.transform.photometry)
std_and_max_around_src() (in module orca.utils.fitsutils)
stokes_IV_imaging() (in module orca.transform.imaging)
str_concat() (in module orca.tasks.fortests)
subband (orca.metadata.stageiii.StageIIIPathsManager attribute)
,
[1]
SUBBAND_NODE_MAP (in module orca.resources.subband_config)
submit_subband_pipeline() (in module orca.tasks.subband_tasks)
submit_subband_pipeline_chained() (in module orca.tasks.subband_tasks)
subtract_and_split() (in module orca.tasks.run_image)
SUN_CHANNELS_OUT (in module orca.transform.imaging)
sun_icrs() (in module orca.utils.coordutils)
swap_fastms_pols() (in module orca.utils.modelutils)
SYSTEM_CONFIG (in module orca.resources.system_config)
T
TAU_A (in module orca.utils.coordutils)
TAU_BOO (in module orca.utils.coordutils)
telescope (in module orca.configmanager)
test_make_dynspec_fits() (in module orca.transform.spectrum)
test_multiprocessing() (in module orca.tasks.fortests)
time_filter() (orca.metadata.pathsmanagers.OfflinePathsManager method)
(orca.metadata.pathsmanagers.PathsManager method)
(orca.metadata.stageiii.StageIIIPathsManager method)
TTCAL_DEV_ENV_PREFIX (in module orca.tasks.peel_experiment)
TTCAL_EXEC (in module orca.wrapper.ttcal)
ttcal_peel_from_data_to_corrected_data() (in module orca.transform.peeling)
TTCAL_SCRIPT (in module orca.tasks.run_image)
U
Ubeam (orca.utils.beam.WoodyBeam attribute)
(orca.utils.beam_nmahesh.woody_beam attribute)
unpack_flag_metadata() (in module orca.utils.flagutils)
utc_times_mapping (orca.metadata.pathsmanagers.OfflinePathsManager attribute)
(orca.metadata.pathsmanagers.PathsManager attribute)
utc_times_txt_path (orca.metadata.pathsmanagers.OfflinePathsManager attribute)
V
Vbeam (orca.utils.beam.WoodyBeam attribute)
(orca.utils.beam_nmahesh.woody_beam attribute)
verbose (orca.utils.calibratormodel.model_generation attribute)
vis (orca.utils.calibratormodel.model_generation property)
VLSS_MAX_SIZE_DEG (in module orca.transform.extractor_pb_75)
(in module orca.transform.ionospheric_dewarping)
VLSSR_CATALOG (in module orca.resources.subband_config)
W
WARP_ANCHOR_THRESH_PIX (in module orca.transform.extractor_pb_75)
WIDEBAND_BANDS (in module orca.transform.post_process_science)
woody_beam (class in orca.utils.beam_nmahesh)
WoodyBeam (class in orca.utils.beam)
work_dir (orca.metadata.stageiii.StageIIIPathsManager attribute)
,
[1]
WORKDIR (in module orca.tasks.peel_experiment)
WORKING_DIR (in module orca.transform.image_warp)
working_dir (orca.metadata.pathsmanagers.OfflinePathsManager property)
write_fits_mask_with_box_xy_coordindates() (in module orca.utils.fitsutils)
write_image_fits() (in module orca.utils.fitsutils)
write_source_file() (orca.utils.calibratormodel.model_generation method)
write_to_flag_column() (in module orca.flagging.flagoperations)
wsclean() (in module orca.wrapper.wsclean)
WSCLEAN_DIRTY (in module orca.tasks.run_image)
WSCLEAN_PHASEC (in module orca.tasks.run_image)
wsclean_run() (in module orca.tasks.run_image)
wsclean_task() (in module orca.tasks.pipeline_tasks)
Z
zenith_coord_at_ovro() (in module orca.utils.coordutils)
zest_with_casa() (in module orca.transform.peeling)
zest_with_ttcal() (in module orca.wrapper.ttcal)
zesting_one_ms_task() (in module orca.tasks.pipeline_tasks)